BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB022F02LP1|AL427925
(855 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1389 766 0.0
3x_Contig914 752 0.0
>3x_Contig1389
Length = 7926
Score = 766 bits (385), Expect = 0.0
Identities = 410/419 (97%)
Strand = Plus / Plus
Query: 6 gatcaccacaaatcgcttccgtttgaagtgaaagaaaagattatcaccagtctaactatg 65
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 7345 gatcaccacaaatcgcttccgtttgacgtgaaagaaaagattatcaccagtctaactatg 7404
Query: 66 ttgagaaataagaacgttatcagccctgagactttgattcaaactatgttcccattgctt 125
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7405 ttgagaaataagaaagttatcagccctgagactttgattcaaactatgttcccattgctt 7464
Query: 126 attgcatactcttcccctagtaattcgatggtccagaattctcacgccaaagagctaaga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7465 attgcatactcttcccctagtaattcgatggtccagaattctcacgccaaagagctaaga 7524
Query: 186 actttaatctacaacactctagtacagttgatgaaatcttgtaacaccagtggtaagaac 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7525 actttaatctacaacactctagtacagttgatgaaatcttgtaacaccagtggtaagaac 7584
Query: 246 caaaaattaaacaaatctacccatgcgttgtgtttcaatttgttggaacagccagattct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7585 caaaaattaaacaaatctacccatgcgttgtgtttcaatttgttggaacagccagattct 7644
Query: 306 caaggtatatgggcatcgaaattgacaagagagttatggagaagaggtatctgggacgat 365
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 7645 caaggtatatcggcatcgaaattcacaagagagttatggagaagaggtatctgggacgat 7704
Query: 366 tcaagatcggttgaaattatgamccatgctgcactacataacgatgttaaaattgcata 424
|||||||||||||||||||||| |||| |||||||||||||| || |||||||| ||||
Sbjct: 7705 tcaagatcggttgaaattatgacccatcctgcactacataaccatcttaaaattccata 7763
>3x_Contig914
Length = 2833
Score = 752 bits (378), Expect = 0.0
Identities = 386/390 (98%)
Strand = Plus / Minus
Query: 464 tgaagaagcgtttgaagaaaacgacgatgaggatgaaatcgatactaccgctttgaagca 523
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2833 tgaagaagcgtttgaagaaaacgacgatgaggatgaaatcgatactaccgctttgaagca 2774
Query: 524 caagctccagatcaacaagaaatctagtaaaagaggtaagaagctagagcaagcacttaa 583
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2773 caagctccagatcaacaagaaatctagtaaaagaggtaagaagctagagcaagcacttaa 2714
Query: 584 ggtcgtaaagaagaaatctgctaaaggtgttcaacagaataatttcttaaatttcagtgc 643
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2713 ggtcgtaaagaagaaatctgctaaaggtgttcaacagaataatttcttaaatttcagtgc 2654
Query: 644 catccatctattacgtgatccacaagggtttgccgagaaattgtttgaaagacatctaag 703
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2653 catccatctattacgtgatccacaagggtttgccgagaaattgtttgaaagacatctaag 2594
Query: 704 tggtaagaattcgaacaaatttgatttcgaacaaaagactgccatcatgcaattattatc 763
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2593 tggtaagaattcgaacaaatttgatttcgaacaaaagactgccatcatgcaattattatc 2534
Query: 764 ccgtttaamaaraacacacaagttaatggttcttggactatattcatacttcttaaaata 823
|||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2533 ccgtttaacaggtacacacaagttaatggttcttggactatattcatacttcttaaaata 2474
Query: 824 cctgacgccaaagcaaagggacgttaccaa 853
||||||||||||||||||||||||||||||
Sbjct: 2473 cctgacgccaaagcaaagggacgttaccaa 2444
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7369
Number of Sequences: 1807
Number of extensions: 7369
Number of successful extensions: 61
Number of sequences better than 1.0e-20: 2
length of query: 855
length of database: 10,358,551
effective HSP length: 16
effective length of query: 839
effective length of database: 10,329,639
effective search space: 8666567121
effective search space used: 8666567121
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)